Description

A Dockerized environment with petsc and its python dependencies bundled together.

Usage

Changelog

Image Tag	Image Size	Description
v0.0.9	843.26MB	reverted back petsc to petsc-lite
v0.0.8	891.6MB	updated the petsc version, switched to petsc instead of petsc-lite, added mumps dependencies
v0.0.7	578.68MB	added the pandas python package to the container, install python packages with --no-cache-dir option
v0.0.6	547.11MB	got rid of the petsc4py, using the root user instead since it caused problems in the latest version of the solver.
v0.0.5	547.28MB	changed the base image from debian slim to alpine 3.12, adjusted the permissions so that the image works as non-root user
v0.0.4	547.27MB	changed the base image from debian slim to alpine 3.12, adjusted the permissions so that the image works as non-root user
v0.0.3	1.78GB	changed the base image from ubuntu 20.04 to debian-slim
v0.0.2	1.77GB	changed theentrypoint to the container for easier use
v0.0.1	1.77GB	initial setup, bundled all the dependencies of petsc

To run the solver with mounted matrices dir

docker run -it -d -w /matrices -v /matrices:/matrices denizgokcin/petsc4py:v0.0.9 /bin/bash -c './run_for_docker.sh beta.lst'

To run two solvers with mounted matrices dir

cd <PATH_FOR_THE_MATRICES_DIR>
docker-compose up --scale app=2 -d

To build PETSc image

docker build -t petsc4py .

To extend the docker image

FROM denizgokcin/petsc4py:<TAG_NAME>

RUN apt-get update \
  && apt-get install -y \
    curl \
    vim

RUN pip3 install \
    h5py \
    pandas