Skip to content

Issues: bwa-mem2/bwa-mem2

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

79 Open 126 Closed
79 Open 126 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Segmentation fault using bwa-mem2:2.2.1--hd03093a_5
#256 opened Jan 31, 2024 by tgurbich
4
bwa and bwa-mem2 relative indexing memory usage
#255 opened Jan 25, 2024 by ImagoXV
2
Segmentation fault with valle-inclan dataset - bwa-mem2 2.2.1 avx512bw
#254 opened Jan 19, 2024 by waltergallegog
1
MacOS M2 chip support
#253 opened Jan 11, 2024 by bianrumo2000115
Problems creating index with bwa-mem2
#252 opened Dec 28, 2023 by mgranada3
1
[Question] How to install bwa-mem2-lisa
#251 opened Dec 22, 2023 by waltergallegog
BWA-MEM2-LISA crashed with code 139
#250 opened Dec 15, 2023 by i-xiaohu
@SaurabhKalikar
3
error while index building
#249 opened Dec 9, 2023 by AlcaArctica
@yuk12
1
Difference in mapping quality and alignment for bwa mem2 compared to bwa mem
#246 opened Sep 29, 2023 by janrehker
5
Tag New Release
#245 opened Sep 21, 2023 by gl-eb
@yuk12
5
Update paths in bwa-mem2-lisa
#244 opened Sep 18, 2023 by aawdeh
@SaurabhKalikar
Index building error
#241 opened Aug 21, 2023 by Will-Huang-861
Mapping quality: bad and normal
#239 opened Aug 14, 2023 by serge2016
1
Allocation of 40.69 GB for suffix_array failed.
#237 opened Jul 30, 2023 by sunta3iouxos
@yuk12
4
Precompiled AVX512 binary not working for Zen 4 Genoa
#236 opened Jun 27, 2023 by nr23730
7
Segmentation fault
#234 opened Jun 15, 2023 by mgujral
2
how to get uniq mapped reads from bamfile generated by bwa-mem2 mem
#232 opened May 23, 2023 by dianzhiyong
Paired mapped Reads, R1(3'end instead of 5'end) and R2 (5'end instead of 3' end)mapped wrong ends
#231 opened May 18, 2023 by WRui
Reproducibility of primary alignments with bwa-mem2
#228 opened Apr 13, 2023 by gh-jphan
6
Segmentation fault (core dumped)
#226 opened Mar 13, 2023 by MoinSheam
6
tried EVERY install method.... and TRIED again,.... ARCH LINUX
#225 opened Mar 3, 2023 by conhibit
2
Suddeny cannot run bwa-mem2 on shared cluster ( "ERROR: prefix too long!")
#224 opened Feb 26, 2023 by DaRinker
5
Error mapping
#223 opened Jan 23, 2023 by jbruxaux
1
Error compile from source
#222 opened Jan 18, 2023 by giusmar
3
bwa-mem2.avx2: src/bwamem.cpp:1770: unsigned char…… failed.
#220 opened Nov 29, 2022 by luckyvivi
@vasimuddin
1
ProTip! Type g i on any issue or pull request to go back to the issue listing page.