Popular repositories

1. Dicom_RT_and_Images_to_Mask Dicom_RT_and_Images_to_Mask Public

   Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

   Python 81 25

2. Segmentation_Evaluation_Tools Segmentation_Evaluation_Tools Public

   Tools for quantitative evaluation of prediction segmentations (Dice, Jaccard, volume similarity, false_negative, false_positive, mean, median, max, and std surface distances)

   Python 8 1

3. RegisteringImages RegisteringImages Public

   Tools for registering images with Dicom Registration files

   Python 8 2

4. Dicom_Data_to_Numpy_Arrays Dicom_Data_to_Numpy_Arrays Public

   For parallel creation of RT structures into numpy arrays for deep learning training purposes

   Python 6

5. Cyclical_Learning_Rate Cyclical_Learning_Rate Public

   Code adapted from https://github.com/bckenstler/CLR

   Jupyter Notebook 4 2

6. Create_RT_From_Dicom_and_Mask Create_RT_From_Dicom_and_Mask Public

   This is for the creation of a Dicom_RT structure using a template RT structure, the dicom images, and a mask

   Python 3