Issues: brainglobe/brainglobe-atlasapi
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Ensure tests do not affect local system when run locally.
enhancement
New feature or request
#302
opened May 20, 2024 by
adamltyson
Move atlas generation code out of the New feature or request
brainglobe-atlasapi
package
enhancement
#295
opened May 16, 2024 by
adamltyson
Atlas resolution as an attribute, not a name.
enhancement
New feature or request
#294
opened May 16, 2024 by
adamltyson
Enforce standardised orientation
enhancement
New feature or request
#293
opened May 16, 2024 by
adamltyson
Save atlases to New feature or request
.brainglobe/atlases
enhancement
#291
opened May 15, 2024 by
adamltyson
Standardise the axial resolution of the allen spinal cord atlas
enhancement
New feature or request
#289
opened May 13, 2024 by
adamltyson
Use pooch to download data
enhancement
New feature or request
#284
opened May 10, 2024 by
adamltyson
[Feature] flexibly generate atlases with different resolutions
enhancement
New feature or request
#280
opened May 9, 2024 by
alessandrofelder
Add updated version of the kim atlas
enhancement
New feature or request
#279
opened May 7, 2024 by
adamltyson
deal with local and remote atlas versions in validate_atlases.py
bug
Something isn't working
enhancement
New feature or request
#274
opened May 2, 2024 by
viktorpm
Decide what to do with New feature or request
atlas_generation/main_script
enhancement
#273
opened Apr 30, 2024 by
adamltyson
[Feature] Add Ambystoma mexicanum (axolotl) atlas
enhancement
New feature or request
new-atlas
#270
opened Apr 19, 2024 by
adamltyson
[BUG] Hemisphere map not correctly set for mpin_zfish_1um_v1.0
bug
Something isn't working
#268
opened Apr 12, 2024 by
PolarBean
[Feature] Are there plans for developing an online version of BrainGlobe-atlasapi?
enhancement
New feature or request
#267
opened Apr 12, 2024 by
PolarBean
[Feature] Functionality to validate an newly-generated local atlas given a path
enhancement
New feature or request
#260
opened Mar 26, 2024 by
alessandrofelder
[Feature] Adding a cave fish atlas
enhancement
New feature or request
new-atlas
#259
opened Mar 25, 2024 by
alessandrofelder
2
Add a a prarie vole atlas?
enhancement
New feature or request
new-atlas
#250
opened Feb 28, 2024 by
adamltyson
[Feature] fixtures to mock invalid atlases
atlasgen
Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule.
enhancement
New feature or request
#200
opened Feb 19, 2024 by
alessandrofelder
A first pass at regenerating atlases that fail our validation scripts
atlasgen
Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule.
enhancement
New feature or request
#201
opened Feb 12, 2024 by
alessandrofelder
4 tasks
[Feature] Make New feature or request
get_local_atlas_version
return None
for not-available atlases.
enhancement
#187
opened Dec 20, 2023 by
alessandrofelder
Save atlases under New feature or request
.brainglobe/atlases
enhancement
#184
opened Nov 24, 2023 by
adamltyson
Support the Gubra "Multimodal 3D Mouse Brain Atlas Framework with the Skull-Derived Coordinate System "
atlasgen
Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule.
enhancement
New feature or request
#203
opened Nov 20, 2023 by
adamltyson
Add Princeton RAtlas
atlasgen
Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule.
enhancement
New feature or request
new-atlas
#204
opened Nov 20, 2023 by
adamltyson
Add cuttlefish atlas
atlasgen
Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule.
enhancement
New feature or request
#206
opened Nov 11, 2023 by
adamltyson
Run finished atlas validation script on existing atlases
atlasgen
Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule.
#208
opened Nov 7, 2023 by
alessandrofelder
3 tasks
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