The BlueGreen labs open science resources provide free tools to manage, access and model environmental data. Projects consist of output of formal research lines, software and hardware implementations through which BlueGreen tries to give back to the open source scientific community. Below you find a short list with links to our most popular projects.
If you find anything missing, a software bug or want to add documentation we refer to our contribution guidelines. Please be mindfull of our code of conduct and consultancy policy within the context of software development.
- MODISTools - extract point based MODIS data -
- appeears - extract point based and regional remote sensing data -
- ecmwfr - ECMWF data on the climate data store (CDS) including ERA5 fields -
- daymetr - high resolution climatology DAYMET data for North America -
- snotelr - SNOTEL snow coverage data -
- hwsdr - download global soil properties data -
- amerifluxr - access Ameriflux data programmatically (with Housen Chu)
- Google Earth Engine subsets - python package to extract point based time series from GEE
- phenor - a phenology modelling framework in R - doi:10.1111/2041-210X.12970
- ONEFlux docker images - automating deployment of the ONEFlux processing pipeline
- phenocamr - process PhenoCam data into start and end of season values -
- phenocam installation tool - installation routine for Netcam SC5 camera hardware
- phenocam installation tool (v2) - installation routine for Netcam Live2 camera hardware
- photosphere - hardware setup of the virtualforest.io project
- TetraPi - a multi-spectral Raspberry pi camera
- RPi camera responses - Raspberry pi camera spectral responses
- FOTO - classify image texture using the Fourier Transform Textural Ordination -
- igrf - calculate the international geomagnetic reference field -
- skylight - a simple sky illuminance model -
- geoloctools - pre-process geolocation tracking data ( 💥 experimental 💥 )
- skytrackr - geolocation by light using a physical sky illuminance model ( 💥 experimental 💥 )
- Jungle Weather - workflow of the Jungle Weather (citizen science) data recovery project
- Jungle Rhythms - workflow of the Jungle Rhythms (citizen science) data recovery project
- A handful of Pixels - an introduction to geospatial data science in R
- R tutorials - code for our collection of tutorials on data science
- R project template - a basic R template to populate project directories
- Landscape element segmentation - a machine learning demo using pyTorch to segment street level imagery
- Linux research environment - a simple bash script to setup a research environment
- R environment setup - a simple R script to install required R libraries (native)
To stay up to date please follow Koen Hufkens at mastodon.social.
