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BioJava 5.4.0
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@josemduarte josemduarte released this 29 Jun 05:44
· 704 commits to master since this release
biojava-5.4.0
9dcddeb

New features

  • Minimal read support for mmCIF files with branched entities (upcoming PDB release July 2020). The new entity type is understood now but branched entities are still treated as non-polymers within BioJava. #868
  • InterfaceFinder class to find interfaces of a given PDB assembly #867
  • New switch in Subunit clusterer useEntityIdForSeqIdentityDetermination #857 #859

Changed

  • Now genbank parser will allow 5'<3' for circular DNA #855

Bug fixes

  • Issue in bonds between atoms of different alt locs (rcsb/mmtf#44) #854
  • Upgrade ciftools-java dependency to latest java-8 compatible release 0.7.1
Assets 2