DeDup v0.12.8

Minor bugfix release. No new functionality, bugfix for division by zero issue for extremely low coverage data with zero mapped reads.

DeDup v0.12.7

Minor bugfix release.

0.12.6

Add extra metrics for mapped_reads to JSON/standard metrics output.

0.12.5

v0.12.5 fixing division by zero issue found by @jfy133

0.12.4

Release 0.12.4 (JSON support)

v0.12.3

Modified travis yml

DeDup v0.11.3

Bugfixes - unix piping should work now again, too!

DeDup v0.11.2

support non prefixed reads      
fix stats       
fix hist        
cleanup debug prints        
more cleanup        
fix tests       
fix bug when read names have M_ or F_ or R_ and allReadAsMerged is set

DeDup v0.10.2

Bugfix for histogram creation, now preseq or dupre can read DeDup histograms automatically

DeDup v0.10.1

Lots of fixes, improvements in determining F-R vs M deduplication
Histograms of merged reads to run complexity estimation methods against (e.g. preseq, dupre for library complexity estimation)