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25 Open 73 Closed
25 Open 73 Closed
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Issues list

geNomad taxonomy about Baltimore classification
#100 opened May 14, 2024 by xjhzjucas
1
The virus identified by genomad weren't annotated as virus sequence by VIBRANT?
#99 opened May 13, 2024 by Caiyulu-818
3
AMR annotations on chromsome?
#97 opened May 9, 2024 by sophiaaredas
1
[feature request] query database clustering enhancement New feature or request good first issue Good for newcomers
#95 opened Apr 28, 2024 by valentynbez
1
Error downloading database
#93 opened Apr 25, 2024 by simeonhebrew
2
License request
#89 opened Apr 11, 2024 by Amanda-Biocortex
1
Support Keras 3
#84 opened Mar 22, 2024 by apcamargo
High discrepancy between the high amount of viruses for geNomad and the low number of complete viruses
#79 opened Feb 29, 2024 by bhagavadgitadu22
5
CLI option to set output prefix enhancement New feature or request
#76 opened Feb 20, 2024 by zclaas
1
How to run genomad on only complete sequences (DTR or ITR)?
#73 opened Jan 25, 2024 by ZongzhiWu
1
Provide prediction intervals enhancement New feature or request
#71 opened Jan 16, 2024 by apcamargo
undefined symbol error in end-to-end pipeline
#65 opened Dec 29, 2023 by DOieGYuan
5
Feature request: GBK/GFF as input
#60 opened Dec 18, 2023 by alexweisberg
2
How should genomad be used appropriately, when there are a huge number of assemblies to be processed.
#59 opened Dec 12, 2023 by actledge
1
error with end-to-end
#53 opened Nov 19, 2023 by abdo3a
5
Unable to run
#51 opened Nov 10, 2023 by WenluYIN
4
Error running Genomad 1.7.1
#50 opened Nov 4, 2023 by mhmism
2
Take circularity into account when applying post-classification filters
#49 opened Nov 3, 2023 by apcamargo
Support for GFF and GBK outputs enhancement New feature or request
#48 opened Nov 3, 2023 by apcamargo
Step skipping doesn't work properly in the classification modules when the output of annotate changes
#46 opened Oct 26, 2023 by apcamargo
Issues running genomad
#43 opened Oct 13, 2023 by david1ibarra
1
Assistance Needed: Unexpected Error and Output Truncation During geNomad Tool Execution
#42 opened Oct 10, 2023 by david1ibarra
4
question about nn-classification
#35 opened Sep 18, 2023 by lilinzhou
3
Is it safe to run genomad directly on nanopore R10.4.1 long reads?
#30 opened Aug 29, 2023 by xinehc
1
Is there a way to get the annotate outputs in a genbank format file?
#28 opened Aug 7, 2023 by liliancaesarbio
9
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