Fluxomic-Prediction

Applying implicit deep learning and convex optimization layers to infer metabolic fluxes from gene expression data

Name		Name	Last commit message	Last commit date
Latest commit History 64 Commits
Data		Data
.gitignore		.gitignore
BioDataParser.py		BioDataParser.py
BioNNDatasets.py		BioNNDatasets.py
EDA.ipynb		EDA.ipynb
MetabolicModelParser.py		MetabolicModelParser.py
Preprocessor.py		Preprocessor.py
README.md		README.md
ResultsViz.ipynb		ResultsViz.ipynb
TissuesDataCreator.py		TissuesDataCreator.py
baseline_eq_nn.py		baseline_eq_nn.py
baseline_nn.py		baseline_nn.py
baseline_opt.py		baseline_opt.py
dataset_eda.ipynb		dataset_eda.ipynb
default_args.py		default_args.py
good-column-5733-2023-12-22-01-05-10-456617		good-column-5733-2023-12-22-01-05-10-456617
good-row-5733-2023-12-22-00-59-59-904165		good-row-5733-2023-12-22-00-59-59-904165
load_results.py		load_results.py
make_dataset.py		make_dataset.py
matrix_tools.py		matrix_tools.py
method.py		method.py
problem_eda.ipynb		problem_eda.ipynb
test.ipynb		test.ipynb
utils.py		utils.py

ammahmoudi/Fluxomic-Prediction