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.hic file chr names NC_000001.11 #340

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Luzmist opened this issue Jan 30, 2024 · 0 comments
Open

.hic file chr names NC_000001.11 #340

Luzmist opened this issue Jan 30, 2024 · 0 comments

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@Luzmist
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Luzmist commented Jan 30, 2024

I'm currently working on post
juicer with .hic file, and I've encountered an
issue with chromosome numbering. Instead
of the conventional numerical representation
(1 to 22), I'm dealing with a different format.
Do you have any insights on how I can
address this? Is it possible to change the chr name in .hic file ? I haven't been able to use juicer tools because of this issue.
Thanks,
Luz

NC_000001.11 248956422
NT_187361.1 175055
NT_187362.1 32032
NT_187363.1 127682
NT_187364.1 66860
NT_187365.1 40176
NT_187366.1

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