Skip to content

Issues: ababaian/serratus

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

33 Open 167 Closed
33 Open 167 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

question about cloud budget
#276 opened Nov 25, 2023 by charlie2021cc
1
Bug in the SRA meta-data analysis from palmID
#271 opened May 15, 2023 by PuravG
additional things to migrate to lovelywater:
#266 opened Dec 14, 2022 by rchikhi
all serratus assemblies (60k accessions)
#260 opened Mar 7, 2022 by rchikhi
13
Hello! Many parts of this tutorial “Running Serratus”are confusing to me. Could you be more specific?
#259 opened Feb 25, 2022 by NickShanyt
6
Download fasta file
#257 opened Feb 14, 2022 by MjelleLab
10
Migrate improved CoV assemblies to lovelywater, and annotate them
#254 opened Dec 7, 2021 by taltman
@rchikhi @ababaian
all RdRP+ macro/micro contigs
#252 opened Mar 27, 2021 by rchikhi
1
TODO: Case study for CoV in environmental samples
#248 opened Feb 22, 2021 by ababaian
all new nido/cov assemblies
#247 opened Feb 7, 2021 by rchikhi
2
assemblies of 1k random SRAs from novel_id90.fa
#246 opened Feb 6, 2021 by rchikhi
10
all .pro assemblies
#242 opened Jan 23, 2021 by rchikhi
10
rVert assemblies
#241 opened Jan 16, 2021 by rchikhi
5
Summary file version inconsistencies
#240 opened Jan 1, 2021 by victorlin
3
Dicistro assemblies
#239 opened Dec 14, 2020 by rchikhi
16
Quenya assemblies
#238 opened Dec 11, 2020 by rchikhi
5
Migrate assembly data to lovelywater
#237 opened Dec 9, 2020 by ababaian
@rchikhi
23
Expand the set of Nidovirales-associated Pfam HMMs for contig identification
#231 opened Aug 7, 2020 by taltman
2
Develop Nido HMM library for genome annotations
#227 opened Jul 25, 2020 by rcedgar
@rchikhi
21
Assemblies with >1 Cov
#212 opened Jul 19, 2020 by rcedgar
@ababaian
8
Come up with source organism description for each genome
#191 opened Jul 10, 2020 by taltman
@pierrebarbera @rcedgar
4
Get NCBI BioProject ID
#190 opened Jul 10, 2020 by taltman
@ababaian
1
Create template.sbt metadata file for batch tbl2asn submission
#189 opened Jul 10, 2020 by taltman
@ababaian
2
Add tbl2asn branch to Darth pipeline
#188 opened Jul 10, 2020 by taltman
@taltman
Specific annotation requirements for viral TPA submissions
#187 opened Jul 10, 2020 by taltman
2 tasks
@taltman
9
ProTip! Type g i on any issue or pull request to go back to the issue listing page.