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Proteome-wide motif search for specific PTM(Post Translational Modification)

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TanerArslan/farnesylation_motif_search

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README.md

README.md

 
 

fernasyl_motif_search.py

fernasyl_motif_search.py

 
 

uniprotproteomeAUP000005640.fasta

uniprotproteomeAUP000005640.fasta

 
 

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Farnesylation motif search

Proteome-wide motif search for specific PTM (Post Translational Modification). Specific amino acid (aa) sequence is searched.

Input

  • fasta file (uniprotproteomeAUP000005640.fasta)

Output

  • Specific motifs with Peptide and Gene symbols as .txt file.

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Proteome-wide motif search for specific PTM(Post Translational Modification)

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bioinformatics parsing python3 object-oriented-programming motif-analysis

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