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@JadhavLab
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SynapticSage/ReadMe.md

Hi there! 🙋‍♂️

I'm Ryan.

I'm a quantitative 🧮 programmer completing a PhD in Neuroscience under Dr. Shantanu Jadhav.

My work spans brain rhythms and temporal representations for solving memory-guided tasks. I have extensive experience in time-series analysis, Bayesian decoding, and emerging statistical sequence models.

After my thesis project, I'm planning projects in a few areas

  • communication subspaces with tensor methods :: going beyond pair-wise communication with product spaces
  • successor models with factorized what, where, and policy streams :: extending Eichenbaum's model
  • content-targeted autoencoders :: filtering signals by content

Collabs welcome 🤝. Let's build something awesome 🧨. Enjoy :)

🧰 Languages and Tools:

Python Julia Terminal vim cpp cpp

Pinned

  1. Neural_Realime-ClosedLoop-PhaseDisruption Neural_Realime-ClosedLoop-PhaseDisruption Public

    ryoung's closed loop module for real-time detection of theta (or beta) phase and triggering optogenetic disruption using the SpikeGadgets software environment (https://spikegadgets.com/)

    C++ 1

  2. CommandLine_Tetris CommandLine_Tetris Public

    Implemented Tetris at the command-line terminal (pure text characters, no GUI) in C++ for fun. About a week of code. Originally tested in PowerShell.

    C++

  3. Tetromate_GoogleAssistantApplication Tetromate_GoogleAssistantApplication Public

    Google Assistant driven tetrode lowering. Let's you take notes about how tetrodes are being lowered with convenient voice commands. Works well with natural language e.g. "lower 5 on tetrode 6" or j…

    Python

  4. mountainsort-2-phy mountainsort-2-phy Public

    Converts moutainsorted clusters to phy for curation using SpikeInterface. Includes a plugin to add mountainsort cluster metrics to phy.

    Python

  5. GoalFetchTask-AnalysisTools GoalFetchTask-AnalysisTools Public

    List of scripts and functions used to pry future-past related codes in the HPC-PFC system

    MATLAB

  6. MuseEEGHeadset-Scrubber MuseEEGHeadset-Scrubber Public

    Scrubs data from Muse EEG headset into a Tidy Data format. https://www.wikiwand.com/en/Tidy_data

    Jupyter Notebook