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Releases: Russel88/MicEco

v0.9.15

03 May 10:38
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Fixed a bug in the ps_venn/ps_euler functions. When running with plot=FALSE some taxa were falsely omitted in the output when group had more than 3 levels.

v0.9.14

26 Mar 15:56
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ps_venn and ps_euler can now return a list of shared and unique taxa across groups, when run with plot=FALSE

v0.9.13

04 Mar 09:50
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Add CLR transformation function, with built-in multiplicative zero-replacement

v0.9.12

11 Feb 13:08
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Added ps_clean_tax function

v0.9.11

15 Jul 07:57
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  • A few bug fixes
  • Add a pruning function
  • Add extra functionality to some functions

v0.9.7

19 Feb 13:10
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  • Added a function for drawing Venn diagrams of shared taxa/ASVs/OTUs across sample groups from a phyloseq object
  • Changed name of phylo_euler to ps_euler

v0.9.6

19 Feb 11:43
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  • Added a function for drawing Euler diagrams of shared taxa/ASVs/OTUs across sample groups from a phyloseq object

v0.9.5

20 Jan 15:43
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  • Added (partial) omega-squared calculation of effect sizes for PERMANOVA (adonis) models
  • Added a (theoretical) rarefaction curve function for phyloseq objects

v0.9.4

06 Mar 10:25
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Added parallel versions of the ses.mpd and ses.mntd functions from the picante package:
ses.mpd.par and ses.mntd.par

v0.9.3

06 Mar 10:26
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Update for Travis CI