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IN PROGRESS. COME BACK LATER.

The Benchling non-free web app has the ability to manually export a zip file of an entire project.

This is an attempt at a script that will wait for such a zip file to appear in a specified directory, parse the html of the lab notes and output them in a more appropriate format for e.g. use on static website.

Usage

./cmd.js dir_to_watch output_dir

Where dir_to_watch is a directory to watch for a new zip file to appear and output_dir is where to write the output.

Current features

Finds all html files, parses out the individual labnote entries and writes them to a single index.html file.

ToDo

  • Differentiate between protocols and lab notes
  • Order lab notes by date-time
  • Get CSS working

License and copyright

Copyright 2018 Marc Juul

License: AGPLv3

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Parse notebook entries from benchling html export zip

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