Troubleshooting guide

Sometimes when developing RMG, you will have issues when you update to the most recent branch. This can be due to a number of reasons. Before posting an issue, try the following commands.

conda env remove -n rmg_env
conda env create -f environment_linux.yml
git fetch official master
git checkout master
git rebase official/master

cd ../RMG-database/
git fetch official master
git checkout master
git rebase official/master

cd ../RMG-Py
source activate rmg_env
make clean
make
make test

If the tests do not pass after you have done this, please post an issue.