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Added a Linear TS search job adapter #695

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Added a Linear TS search job adapter #695

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@alongd alongd commented Aug 21, 2023

Added a method for generating TS structures from atom mapped reactants and products.
The method works for unimolecular reactions, and at present is only implemented for isomerization reactions.

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codecov bot commented Aug 22, 2023

Codecov Report

Attention: Patch coverage is 87.93103% with 35 lines in your changes are missing coverage. Please review.

Project coverage is 73.97%. Comparing base (3631196) to head (cbec920).

Files Patch % Lines
arc/job/adapters/ts/linear.py 75.63% 18 Missing and 11 partials ⚠️
arc/mapping/engine.py 86.66% 3 Missing and 3 partials ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #695      +/-   ##
==========================================
+ Coverage   73.80%   73.97%   +0.17%     
==========================================
  Files          99      101       +2     
  Lines       27352    27596     +244     
  Branches     5718     5746      +28     
==========================================
+ Hits        20187    20415     +228     
- Misses       5738     5745       +7     
- Partials     1427     1436       +9     
Flag Coverage Δ
unittests 73.97% <87.93%> (+0.17%) ⬆️

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@alongd alongd force-pushed the linear_ts branch 4 times, most recently from e22d3b6 to 8825e9f Compare May 15, 2024 06:10
@alongd alongd marked this pull request as ready for review May 15, 2024 09:26
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