Popular repositories

1. ProHap ProHap Public

   Proteogenomics database-generation tool for protein haplotypes and variants

   Python 5 2

2. VariantPeptideIdentification VariantPeptideIdentification Public

   Code related to the "Retention time and fragmentation predictors increase confidence in identification of common variant peptides" publication

   Python 1

3. py-pgatk-UiB-fork py-pgatk-UiB-fork Public

   Forked from bigbio/py-pgatk

   Python tools for proteogenomics analysis toolkit

   Python

4. FindingHaploSignatures FindingHaploSignatures Public

   Code related to the "Finding Haplotypic Signatures in Proteins" publication

   Python

5. ProHapDatabaseAnalysis ProHapDatabaseAnalysis Public

   Pipeline to analyze protein databases created by ProHap / ProVar

   Jupyter Notebook

6. ProHap_PeptideAnnotator ProHap_PeptideAnnotator Public

   Pipeline to annotate peptide identifications when using protein databases made by of ProHap / ProVar

   Python