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remove editdistance warning since it is no longer required
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sfchen committed Jul 31, 2017
1 parent 64e6f5d commit 4def179
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5 changes: 0 additions & 5 deletions util.py
Expand Up @@ -23,11 +23,6 @@
else:
EDIT_DISTANCE_MODULE_EXISTS = True

if EDIT_DISTANCE_MODULE_EXISTS==False and EDIT_DISTANCE_CTYPES_LOADED == False:
print("Warning: editdistance module doesn't exist, it will make AfterQC extremely slow")
print("If you are using python, run: pip install editdistance")
print("If you are using pypy, run: make, in AfterQC folder to build editdistance with ctypes")


COMP = {"A" : "T", "T" : "A", "C" : "G", "G" : "C", "a" : "t", "t" : "a", "c" : "g", "g" : "c", "N":"N", "\n":"\n"}

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