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Update README.md
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sfchen committed May 17, 2016
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Expand Up @@ -12,11 +12,11 @@ Currently it supports processing data from HiSeq 2000/2500/3000/4000, Nextseq 50
* For pair-end sequencing data, `AfterQC` automatically corrects low quality wrong bases in overlapped area of read1/read2
* Detects and eliminates bubble artifact caused by sequencer due to fluid dynamics issues
* Single molecule barcode sequencing support: if all reads have a single molecule barcode (see duplex sequencing), `AfterQC` shifts the barcodes from the reads to the fastq query names
* Support single-end sequencing or pair-end sequencing
* Support both single-end sequencing and pair-end sequencing data

# Get AfterQC
* latest: `git clone https://github.com/OpenGene/AfterQC.git`
* stable: [0.3.0 (released on 2016-05-07)](https://github.com/OpenGene/AfterQC/archive/Release-0.3.0.zip)
* stable: [0.4.0 (released on 2016-05-17)](https://github.com/OpenGene/AfterQC/archive/Release-0.4.0.zip)

# Dependency:
`AfterQC` uses `editdistance` module, run following before using `AfterQC`:
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