update pysam files #3800
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| name: CI | |
| on: | |
| push: | |
| pull_request: | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| jobs: | |
| build-ubuntu: | |
| # The CMake configure and build commands are platform agnostic and should work equally well on Windows or Mac. | |
| # You can convert this to a matrix build if you need cross-platform coverage. | |
| # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ 3.7 ] | |
| steps: | |
| - name: Setup cmake | |
| uses: jwlawson/actions-setup-cmake@v1.12 | |
| with: | |
| cmake-version: '3.24.x' | |
| - name: Test cmake version | |
| run: cmake --version | |
| - name: Set relative paths | |
| run: | | |
| LKDIR=$GITHUB_WORKSPACE/lk | |
| echo "LKDIR=$LKDIR" >> $GITHUB_ENV | |
| WEXDIR=$GITHUB_WORKSPACE/wex | |
| echo "WEXDIR=$WEXDIR" >> $GITHUB_ENV | |
| SSCDIR=$GITHUB_WORKSPACE/ssc | |
| echo "SSCDIR=$SSCDIR" >> $GITHUB_ENV | |
| RAPIDJSONDIR=$GITHUB_WORKSPACE/ssc | |
| echo "RAPIDJSONDIR=$RAPIDJSONDIR" >> $GITHUB_ENV | |
| SAMNTDIR=$GITHUB_WORKSPACE/sam | |
| echo "SAMNTDIR=$SAMNTDIR" >> $GITHUB_ENV | |
| - name: Install Dependencies | |
| run: | | |
| sudo apt-get update --fix-missing | |
| sudo apt-get install -y \ | |
| freeglut3-dev \ | |
| libcurl4-openssl-dev \ | |
| libfontconfig-dev \ | |
| libgl1-mesa-dev \ | |
| libgtk2.0-dev \ | |
| mesa-common-dev \ | |
| unzip | |
| - name: Get GCC version | |
| run: gcc --version | |
| - name: Get libc version | |
| run: ldd --versio | |
| - name: Get branch name | |
| run: | | |
| # Short name for current branch. base ref is set on push builds, head ref is for pull request builds | |
| if [ -z ${GITHUB_HEAD_REF+x} ]; then GIT_BRANCH=${GITHUB_BASE_REF:-${GITHUB_REF#refs/heads/}}; else GIT_BRANCH=${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}; fi | |
| echo "GIT_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV | |
| - name: Determine branches for other repos | |
| shell: bash {0} | |
| run: | | |
| echo "GITHUB_REPOSITORY_OWNER=${GITHUB_REPOSITORY_OWNER}" >> $GITHUB_ENV | |
| git ls-remote --heads --exit-code https://github.com/${GITHUB_REPOSITORY_OWNER}/lk.git $GIT_BRANCH | |
| if [[ $? != "0" ]]; then echo "LK_BRANCH=develop" >> $GITHUB_ENV; else echo "LK_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV; fi | |
| git ls-remote --heads --exit-code https://github.com/${GITHUB_REPOSITORY_OWNER}/wex.git $GIT_BRANCH | |
| if [[ $? != "0" ]]; then echo "WEX_BRANCH=develop" >> $GITHUB_ENV; else echo "WEX_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV; fi | |
| git ls-remote --heads --exit-code https://github.com/${GITHUB_REPOSITORY_OWNER}/ssc.git $GIT_BRANCH | |
| if [[ $? != "0" ]]; then echo "SSC_BRANCH=develop" >> $GITHUB_ENV; else echo "SSC_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV; fi | |
| - name: Install wxWidgets | |
| run: | | |
| wget -q https://github.com/wxWidgets/wxWidgets/releases/download/v3.2.3/wxWidgets-3.2.3.tar.bz2 | |
| tar jxf wxWidgets-3.2.3.tar.bz2 | |
| cd wxWidgets-3.2.3 | |
| ./configure --prefix=$HOME/wx-3.2.3 --enable-shared=no --enable-stl=yes --enable-debug=no --with-gtk=2 --with-libjpeg=builtin --with-libpng=builtin --with-regex=builtin --with-libtiff=builtin --with-zlib=builtin --with-expat=builtin --without-libjbig --without-liblzma --without-gtkprint --with-libnotify=no --with-libmspack=no --with-gnomevfs=no --with-opengl=yes --with-sdl=no --with-cxx=11 | |
| make -j2 all install | |
| sudo ln -s $HOME/wx-3.2.3/bin/wx-config /usr/local/bin/wx-config-3 | |
| ls $HOME/wx-3.2.3/bin | |
| wx-config-3 --cflags | |
| - name: Add wxWidgets to path | |
| run: echo ${HOME}/wx-3.2.3/bin >> $GITHUB_PATH | |
| - name: Checkout lk | |
| uses: actions/checkout@v2 | |
| with: | |
| path: lk | |
| repository: ${{ env.GITHUB_REPOSITORY_OWNER }}/lk | |
| ref: ${{ env.LK_BRANCH }} | |
| - name: Checkout wex | |
| uses: actions/checkout@v2 | |
| with: | |
| path: wex | |
| repository: ${{ env.GITHUB_REPOSITORY_OWNER }}/wex | |
| ref: ${{ env.WEX_BRANCH }} | |
| - name: Checkout ssc | |
| uses: actions/checkout@v2 | |
| with: | |
| path: ssc | |
| repository: ${{ env.GITHUB_REPOSITORY_OWNER }}/ssc | |
| ref: ${{ env.SSC_BRANCH }} | |
| - name: Checkout SAM | |
| uses: actions/checkout@v2 | |
| with: | |
| path: sam | |
| - name: Build lk | |
| run: | | |
| cd ${LKDIR} | |
| mkdir ${LKDIR}/build | |
| cd ${LKDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release | |
| cmake --build . -j 4 --target lk | |
| - name: Build wex | |
| run: | | |
| mkdir ${WEXDIR}/build | |
| cd ${WEXDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release | |
| cmake --build . -j 4 --target wex | |
| - name: Build ssc | |
| run: | | |
| mkdir ${SSCDIR}/build | |
| cd ${SSCDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release -DSAM_SKIP_TESTS=1 -DSAM_SKIP_TOOLS=1 -DSAMAPI_EXPORT=0 | |
| cmake --build . -j 4 --target ssc | |
| - name: Build sam | |
| run: | | |
| mkdir ${SAMNTDIR}/build | |
| cd ${SAMNTDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release -DSAMAPI_EXPORT=0 && make -j 4 | |
| - name: Generate test file | |
| shell: bash {0} | |
| run: results="1"; nohup xvfb-run ${SAMNTDIR}"/build/deploy/linux_64/SAMOS.bin" no_sam_file ${SAMNTDIR}"/build/deploy/test_script_ow.lk" &>/dev/null & while [[ $results != "0" ]]; do sleep 60; lines=$(wc -l ${SAMNTDIR}/build/test_results_linux64.csv | cut -d' ' -f1); echo $lines; grep -i final_configuration_eof ${SAMNTDIR}/build/test_results_linux64.csv; results=$?; done | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: Test Results Linux | |
| path: ${{env.SAMNTDIR}}/build/test_results_linux64.csv | |
| - name: Evaluate test results vs Linux file | |
| run: | | |
| python ${SAMNTDIR}/test/compare_lk_test_output.py ${SAMNTDIR}/test_results_linux64.csv ${SAMNTDIR}/build/test_results_linux64.csv false | |
| - name: Evaluate test results vs Windows file | |
| run: | | |
| python $SAMNTDIR/test/compare_lk_test_output.py ${SAMNTDIR}/test_results_win64.csv ${SAMNTDIR}/build/test_results_linux64.csv true | |
| - name: Run SSC Variable & SAM Defaults Differ | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r ${SAMNTDIR}/test/requirements.txt | |
| python ${SAMNTDIR}/test/run_defaults_diff.py | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: SSC Var & SAM Defaults Diff | |
| path: ${{env.SAMNTDIR}}/version_diff.json | |
| build-mac: | |
| runs-on: macos-latest | |
| steps: | |
| - name: Setup cmake | |
| uses: jwlawson/actions-setup-cmake@v1.12 | |
| with: | |
| cmake-version: '3.24.x' | |
| - name: Test cmake version | |
| run: cmake --version | |
| - name: Set relative paths | |
| run: | | |
| LKDIR=$GITHUB_WORKSPACE/lk | |
| echo "LKDIR=$LKDIR" >> $GITHUB_ENV | |
| WEXDIR=$GITHUB_WORKSPACE/wex | |
| echo "WEXDIR=$WEXDIR" >> $GITHUB_ENV | |
| SSCDIR=$GITHUB_WORKSPACE/ssc | |
| echo "SSCDIR=$SSCDIR" >> $GITHUB_ENV | |
| RAPIDJSONDIR=$GITHUB_WORKSPACE/ssc | |
| echo "RAPIDJSONDIR=$RAPIDJSONDIR" >> $GITHUB_ENV | |
| SAMNTDIR=$GITHUB_WORKSPACE/sam | |
| echo "SAMNTDIR=$SAMNTDIR" >> $GITHUB_ENV | |
| - name: Get branch name | |
| run: | | |
| # Short name for current branch. base ref is set on push builds, head ref is for pull request builds | |
| if [ -z ${GITHUB_HEAD_REF+x} ]; then GIT_BRANCH=${GITHUB_BASE_REF:-${GITHUB_REF#refs/heads/}}; else GIT_BRANCH=${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}; fi | |
| echo "GIT_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV | |
| - name: Determine branches for other repos | |
| shell: bash {0} | |
| run: | | |
| echo "GITHUB_REPOSITORY_OWNER=${GITHUB_REPOSITORY_OWNER}" >> $GITHUB_ENV | |
| git ls-remote --heads --exit-code https://github.com/${GITHUB_REPOSITORY_OWNER}/lk.git $GIT_BRANCH | |
| if [[ $? != "0" ]]; then echo "LK_BRANCH=develop" >> $GITHUB_ENV; else echo "LK_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV; fi | |
| git ls-remote --heads --exit-code https://github.com/${GITHUB_REPOSITORY_OWNER}/wex.git $GIT_BRANCH | |
| if [[ $? != "0" ]]; then echo "WEX_BRANCH=develop" >> $GITHUB_ENV; else echo "WEX_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV; fi | |
| git ls-remote --heads --exit-code https://github.com/${GITHUB_REPOSITORY_OWNER}/ssc.git $GIT_BRANCH | |
| if [[ $? != "0" ]]; then echo "SSC_BRANCH=develop" >> $GITHUB_ENV; else echo "SSC_BRANCH=$GIT_BRANCH" >> $GITHUB_ENV; fi | |
| - name: Install wxWidgets | |
| run: | | |
| wget -q https://github.com/wxWidgets/wxWidgets/releases/download/v3.2.3/wxWidgets-3.2.3.tar.bz2 | |
| tar jxf wxWidgets-3.2.3.tar.bz2 | |
| cd wxWidgets-3.2.3 | |
| ./configure --prefix=$HOME/local/wx-3.2.3/Release --enable-stl=yes --enable-shared=no --disable-debug_flag --with-cocoa --enable-universal_binary=x86_64,arm64 --enable-unicode --enable-webview --disable-mediactrl --with-cxx=11 --with-macosx-version-min=10.15 --with-libjpeg=builtin --with-libpng=builtin --with-regex=builtin --with-libtiff=builtin --with-zlib=builtin --with-expat=builtin | |
| make clean | |
| make -j4 | |
| make install | |
| ln -s $HOME/local/wx-3.2.3/Release/bin/wx-config /usr/local/bin/wx-config-3 | |
| wx-config-3 --cflags | |
| - name: Checkout lk | |
| uses: actions/checkout@v2 | |
| with: | |
| path: lk | |
| repository: ${{ env.GITHUB_REPOSITORY_OWNER }}/lk | |
| ref: ${{ env.LK_BRANCH }} | |
| - name: Checkout wex | |
| uses: actions/checkout@v2 | |
| with: | |
| path: wex | |
| repository: ${{ env.GITHUB_REPOSITORY_OWNER }}/wex | |
| ref: ${{ env.WEX_BRANCH }} | |
| - name: Checkout ssc | |
| uses: actions/checkout@v2 | |
| with: | |
| path: ssc | |
| repository: ${{ env.GITHUB_REPOSITORY_OWNER }}/ssc | |
| ref: ${{ env.SSC_BRANCH }} | |
| - name: Checkout SAM | |
| uses: actions/checkout@v2 | |
| with: | |
| path: sam | |
| - name: Build lk | |
| run: | | |
| cd ${LKDIR} | |
| mkdir ${LKDIR}/build | |
| cd ${LKDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release | |
| cmake --build . -j 4 --target lk | |
| - name: Build wex | |
| run: | | |
| mkdir ${WEXDIR}/build | |
| cd ${WEXDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release | |
| cmake --build . -j 4 --target wex | |
| - name: Build ssc | |
| run: | | |
| mkdir ${SSCDIR}/build | |
| cd ${SSCDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release -DSAM_SKIP_TESTS=1 -DSAM_SKIP_TOOLS=1 -DSAMAPI_EXPORT=0 | |
| cmake --build . -j 4 --target ssc | |
| - name: Build sam | |
| run: | | |
| mkdir ${SAMNTDIR}/build | |
| cd ${SAMNTDIR}/build | |
| cmake .. -DCMAKE_BUILD_TYPE=Release -DSAMAPI_EXPORT=0 && make -j 4 | |
| - name: Generate test file | |
| shell: bash {0} | |
| run: results="1"; nohup ${SAMNTDIR}/build/SAMOS.app/Contents/MacOS/SAMOS no_sam_file ${SAMNTDIR}/deploy/test_script_ow.lk &>/dev/null & while [[ $results != "0" ]]; do sleep 60; lines=$(wc -l ${SAMNTDIR}/build/SAMOS.app/Contents/MacOS/../../test_results_osx64.csv | cut -d' ' -f1); ls ${SAMNTDIR}/build/SAMOS.app/Contents/MacOS/../../; echo $lines; grep -i final_configuration_eof ${SAMNTDIR}/build/SAMOS.app/Contents/MacOS/../../test_results_osx64.csv; results=$?; done | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: Test Results Mac | |
| path: ${{env.SAMNTDIR}}/build/SAMOS.app/test_results_osx64.csv | |
| - name: Evaluate test results vs Mac file | |
| run: | | |
| python ${SAMNTDIR}/test/compare_lk_test_output.py ${SAMNTDIR}/test_results_osx64.csv ${SAMNTDIR}/build/SAMOS.app/Contents/MacOS/../../test_results_osx64.csv false | |
| - name: Evaluate test results vs Windows file | |
| run: | | |
| python $SAMNTDIR/test/compare_lk_test_output.py ${SAMNTDIR}/test_results_win64.csv ${SAMNTDIR}/build/SAMOS.app/Contents/MacOS/../../test_results_osx64.csv true |