Popular repositories

1. bgcflow bgcflow Public

   Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)

   Python 24 7

2. bgcflow_wrapper bgcflow_wrapper Public

   A snakemake wrapper and utility tools command line interface for BGCFlow.

   Python 2 1

3. AbsPresTree AbsPresTree Public

   Forked from OmkarSaMo/AbsPresTree

   Create a phylogenetic tree with an absence/presence matrix of biosynthetic gene clusters

   Python 1

4. snakemake-UmetaFlow snakemake-UmetaFlow Public

   Created for testing the metabolomics pipeline through snakemake

   Python 1

5. bgcflow_dbt-duckdb bgcflow_dbt-duckdb Public

   An ELT framework based on DBT and DuckDB to process BGCFlow output tables

   Shell 1 1

6. Type1_Protospacers Type1_Protospacers Public

   Script for the identification of type I(-C) protospacer sequences and evaluation of off-target sites.

   Jupyter Notebook 1