Popular repositories

1. MetaSeq-Toolkit MetaSeq-Toolkit Public

   This pipeline is intended to be a convenient way to work though large sets of metagenomic or metatranscriptiomic datasets while also retaining high analytical flexibility due to retained intermedia…

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2. Atlantic-Ocean-Metagenomes Atlantic-Ocean-Metagenomes Public

   Assembly and analysis pipeline for twenty-two metagenomic samples from the Southern and Atlantic Ocean.

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3. R-function-plot_lm- R-function-plot_lm- Public

   R function to easily plot linear or higher order models using a explanatory and a response variable. Includes a options of graphical adjustments

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4. R-Function-ComCore R-Function-ComCore Public

   Functions to easily identify shared features in samples of differend groups

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5. R-Function-RankCurve R-Function-RankCurve Public

   Function for quick and easy plotting of rank abundance curves for ecological abundance data, including summarization functionality for different taxonomic levels

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6. KEGG-Reference-builder KEGG-Reference-builder Public

   Short programm to build a KEGG reference for metagenomes from BRITE hierarchies; Intended for GhostKOALA output but works with any KO dataset

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