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These course materials are forked from the Introduction to the Command Line for Genomics by Data Carpentry, and has been adapted for use with the Garvan HPC affectionately known as "Wolfpack".

Shell Genomics lessons

An introduction to the Unix shell for people working with genomics data. This lesson is part of the Data Carpentry Genomics Workshop. Please see https://kccg.github.io/shell-genomics/ for a rendered version of this material.

Contribution

Make a suggestion or correct an error by raising an Issue.

Code of Conduct

All participants should agree to abide by the Data Carpentry Code of Conduct.

Authors

This version of the course materials has been edited by j.reeves@garvan.org.au. The original Shell Genomics workshop is authored and maintained by the community.

Packages

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Languages

  • Python 84.3%
  • R 7.9%
  • Makefile 6.7%
  • Other 1.1%