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Add F-beta score #86

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Add F-beta score #86

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05fb32d
add F-beta Score
shawntanzk May 13, 2022
246c20f
modify F-beta
shawntanzk May 19, 2022
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36 changes: 35 additions & 1 deletion dev/ontology/stato.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
ontologyIRI="http://purl.obolibrary.org/obo/stato.owl"
versionIRI="http://purl.obolibrary.org/obo/stato.owl/1.5">
<Prefix name="" IRI="http://purl.obolibrary.org/obo/stato.owl"/>
<Prefix name="" IRI="http://purl.obolibrary.org/obo/stato.owl/"/>
<Prefix name="owl" IRI="http://www.w3.org/2002/07/owl#"/>
<Prefix name="rdf" IRI="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
<Prefix name="xml" IRI="http://www.w3.org/XML/1998/namespace"/>
Expand Down Expand Up @@ -2180,6 +2180,9 @@
<Declaration>
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000606"/>
</Declaration>
<Declaration>
<Class IRI="http://purl.obolibrary.org/obo/STATO_0001000"/>
</Declaration>
<Declaration>
<ObjectProperty IRI="http://purl.obolibrary.org/obo/BFO_0000050"/>
</Declaration>
Expand Down Expand Up @@ -12845,6 +12848,10 @@
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000606"/>
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000039"/>
</SubClassOf>
<SubClassOf>
<Class IRI="http://purl.obolibrary.org/obo/STATO_0001000"/>
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000282"/>
</SubClassOf>
<DisjointClasses>
<Class IRI="http://purl.obolibrary.org/obo/OBI_0000115"/>
<Class IRI="http://purl.obolibrary.org/obo/OBI_0300311"/>
Expand Down Expand Up @@ -39482,6 +39489,33 @@ https://www.biorxiv.org/content/biorxiv/early/2019/10/22/801696.full.pdf</Litera
<IRI>http://purl.obolibrary.org/obo/STATO_0000606</IRI>
<Literal>q-statistic</Literal>
</AnnotationAssertion>
<AnnotationAssertion>
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000115"/>
<IRI>http://purl.obolibrary.org/obo/STATO_0001000</IRI>
<Literal>A numeric measurement of classification accuracy calculated as the weighted geometric mean of precision and recall.</Literal>
</AnnotationAssertion>
<AnnotationAssertion>
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/>
<IRI>http://purl.obolibrary.org/obo/STATO_0001000</IRI>
<IRI>http://orcid.org/0000-0001-7258-9596</IRI>
</AnnotationAssertion>
<AnnotationAssertion>
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000119"/>
<IRI>http://purl.obolibrary.org/obo/STATO_0001000</IRI>
<Literal>PMID:34088715</Literal>
</AnnotationAssertion>
<AnnotationAssertion>
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/STATO_0000041"/>
<IRI>http://purl.obolibrary.org/obo/STATO_0001000</IRI>
<Literal>https://scikit-learn.org/stable/modules/generated/sklearn.metrics.fbeta_score.html

from sklearn.metrics import fbeta_score</Literal>
</AnnotationAssertion>
<AnnotationAssertion>
<AnnotationProperty abbreviatedIRI="rdfs:label"/>
<IRI>http://purl.obolibrary.org/obo/STATO_0001000</IRI>
<Literal>F-beta score</Literal>
</AnnotationAssertion>
<SubAnnotationPropertyOf>
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/STATO_0000032"/>
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000118"/>
Expand Down