GitHub - GfellerLab/MetacellAnalysisTutorial: Tutorial on construction and analysis of metacells

This repository serves as the source code for the Metacell Analysis Tutorial.

This tutorial is a part of our study on the use of the metacell concept in single-cell genomics.

Name		Name	Last commit message	Last commit date
Latest commit History 136 Commits
R		R
_bookdown_files		_bookdown_files
docs		docs
functional_chunks		functional_chunks
images		images
sub_pages		sub_pages
01-Requirements.Rmd		01-Requirements.Rmd
10-intro.Rmd		10-intro.Rmd
21-MC_construction_discrete.Rmd		21-MC_construction_discrete.Rmd
22-Metacells_QCs.Rmd		22-Metacells_QCs.Rmd
30-MC_analysis_discrete.Rmd		30-MC_analysis_discrete.Rmd
31-downstream_continuous.Rmd		31-downstream_continuous.Rmd
40-integration_analysis.Rmd		40-integration_analysis.Rmd
50-references.Rmd		50-references.Rmd
Metacell_tutorial.Rproj		Metacell_tutorial.Rproj
README.md		README.md
SEACells_requirements.txt		SEACells_requirements.txt
_bookdown.yml		_bookdown.yml
_output.yml		_output.yml
biochemistry-and-cell-biology.csl		biochemistry-and-cell-biology.csl
chicago-fullnote-bibliography.csl		chicago-fullnote-bibliography.csl
citations.bib		citations.bib
environment_MetacellTutorial.yml		environment_MetacellTutorial.yml
index.Rmd		index.Rmd
packages.bib		packages.bib
preamble.tex		preamble.tex
style.css		style.css

GfellerLab/MetacellAnalysisTutorial