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@Gabaldonlab

Gabaldon lab

Github repository of Gabaldon lab

Pinned

  1. redundans redundans Public

    Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

    C++ 123 19

  2. perSVade perSVade Public

    perSVade: personalized Structural Variation detection

    Python 34 4

  3. haplotypo haplotypo Public

    This is the Haplotypo repository

    Python 20 6

  4. jloh jloh Public

    A tool to extract LOH blocks from VCF, BAM and FASTA data

    Python 19 1

Repositories

Showing 10 of 47 repositories
  • lung_microbiome_16S Public
    R 0 0 0 0 Updated May 9, 2024
  • perSVade Public

    perSVade: personalized Structural Variation detection

    Python 34 GPL-3.0 4 1 0 Updated Apr 29, 2024
  • ete Public Forked from etetoolkit/ete

    Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

    Python 0 GPL-3.0 216 0 0 Updated Apr 26, 2024
  • jloh Public

    A tool to extract LOH blocks from VCF, BAM and FASTA data

    Python 19 GPL-3.0 1 1 1 Updated Feb 19, 2024
  • how2code Public

    Technical seminar regarding good practices in writing code and documentation

    Python 0 0 0 0 Updated Feb 14, 2024
  • karyon Public

    This is the Karyon Pipeline

    Python 3 GPL-3.0 1 0 0 Updated Jan 31, 2024
  • Candida_nextPARS Public
    Python 0 0 0 0 Updated Jan 29, 2024
  • crossmapper Public

    Crossmapper software

    Python 9 GPL-3.0 3 3 0 Updated Dec 22, 2023
  • Q-PHAST Public
    Python 0 0 0 0 Updated Dec 21, 2023
  • redundans Public

    Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

    C++ 123 GPL-3.0 19 0 0 Updated Dec 15, 2023
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