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@DSIMB

DSIMB

Dynamics of Structures and Interactions of Biological Macromolecules

Popular repositories

  1. SWORD2 SWORD2 Public

    SWift and Optimized Recognition of protein Domains

    Perl 20 2

  2. PoincareMSA PoincareMSA Public

    Detection of the structural, evolutionary and functional relationship between different proteins and protein families requires comparative analysis of their amino acid sequences through multiple se…

    Jupyter Notebook 9 2

  3. MEDUSA MEDUSA Public

    A Deep Learning based protein flexibility prediction tool.

    Perl 8 2

  4. PYTHIA PYTHIA Public

    Deep Learning Approach For Local Protein Conformation Prediction

    Perl 3

  5. ICARUS ICARUS Public

    Flexible protein structural alignment based on Protein Units

    Perl 3 1

  6. pepit pepit Public

    The PepIT program proposes peptides that may interact with a given protein. PepIT is based on a non-sequential alignment algorithm to identify peptide binding sites that share geometrical and physi…

    R 1

Repositories

Showing 10 of 11 repositories
  • pepit Public

    The PepIT program proposes peptides that may interact with a given protein. PepIT is based on a non-sequential alignment algorithm to identify peptide binding sites that share geometrical and physicochemical properties with regions on the target protein.

    R 1 0 0 0 Updated May 7, 2024
  • PoincareMSA Public

    Detection of the structural, evolutionary and functional relationship between different proteins and protein families requires comparative analysis of their amino acid sequences through multiple sequence alignment. While a direct analysis of the resulting data allows to identify conserved regions, it does not provide a general and broad view on …

    Jupyter Notebook 9 2 3 0 Updated Sep 22, 2023
  • PYTHIA Public

    Deep Learning Approach For Local Protein Conformation Prediction

    Perl 3 0 0 1 Updated Jun 14, 2023
  • SWORD2 Public

    SWift and Optimized Recognition of protein Domains

    Perl 20 2 1 0 Updated May 12, 2023
  • ICARUS Public

    Flexible protein structural alignment based on Protein Units

    Perl 3 1 0 0 Updated May 9, 2023
  • AMBROSIA Public
    Python 0 0 0 0 Updated Jan 20, 2023
  • MEDUSA Public

    A Deep Learning based protein flexibility prediction tool.

    Perl 8 2 1 0 Updated Oct 18, 2022
  • test_fork Public

    This is a fork of my test repo

    0 0 0 0 Updated Sep 2, 2022
  • openfold Public Forked from aqlaboratory/openfold

    Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

    Python 0 Apache-2.0 455 0 0 Updated Jun 23, 2022
  • GC-ANN-Enzyme-Concentration-Selection Public
    R 0 MIT 0 0 0 Updated Oct 28, 2019
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