Popular repositories
-
NetProphet_2.0
NetProphet_2.0 PublicA “data light” TF-network mapping algorithm using only gene expression and genome sequence data.
-
Dual_Threshold_Optimization
Dual_Threshold_Optimization PublicDual threshold optimization for identifying convergent evidence: TF binding locations and TF perturbation responses.
-
-
TFPertRespExplainer
TFPertRespExplainer PublicPredict genes' response to perturbations and explains which genomic factors determine the response predictions.
-
Repositories
- callvariants Public
A variant calling workflow suitable for both checking genotypes and processing data for BSA experiments
- yeastdnnexplorer Public
A development environment to explore implementations of deep neural networks for predicting the relationship between transcription factor and target genes using binding and perturbation data
-
- trace_recalling Public
Trace Recalling is a novel method for deconvoluting double traces that result from simultaneously sequencing two DNA templates. Trace Recalling identifies up to two bases at each position of such a trace.
- YeastCallingCardsDB Public
A Django managed shiny app for storing and visualizing Yeast Calling Cards data
-
- brentlabRnaSeqTools Public
