An Rscript wrapper around the ranger package of R. Contains a Docker image to ensure portability of the R script.
First column must contain the sample class. It must be a character not a number.
All other columns must contain variable measurements.
Example: An example is given below. The first column is called "sample_class" and contains the sample class for breast cancer tumors. It has two levels "benign" or "malign".
| sample_class | clump | uniformity_cell_size | uniformity_cell_shape | adhesion | epithelial_cell_size | bare_nuclei | chromatin | nucleoli | mitoses |
|---|---|---|---|---|---|---|---|---|---|
| benign | 5 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 1 |
| benign | 5 | 4 | 4 | 5 | 7 | 10 | 3 | 2 | 1 |
| benign | 3 | 1 | 1 | 1 | 2 | 2 | 3 | 1 | 1 |
| benign | 6 | 8 | 8 | 1 | 3 | 4 | 3 | 7 | 1 |
| benign | 4 | 1 | 1 | 3 | 2 | 1 | 3 | 1 | 1 |
| malign | 8 | 10 | 10 | 8 | 7 | 10 | 9 | 7 | 1 |
| benign | 1 | 1 | 1 | 1 | 2 | 10 | 3 | 1 | 1 |
| benign | 2 | 1 | 2 | 1 | 2 | 1 | 3 | 1 | 1 |
| benign | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 5 |