0.1.0 Submission Release 🧬 🧬 🧬

🚀 What's Changed

Models

• Implement MatchMaker by @andrejlamov in #67
• Implement GCN-BMP by @mughetto in #71
• Implement DeepDrug by @kajocina in #68
• Implement DeepDDI by @hzcheney in #63
• Implement CASTER by @andriy-nikolov in #73
• Implement MHCADDI by @sebastiandro in #74
• Implement DeepDDS by @kkaris in #53
• Implement SSIDDI by @YuWVandy in #77
• Implement DeepDDS and CASTER defaults and remove DeepDDS Softmax bug by @benedekrozemberczki in #81
• Implement MRGNN by @benedekrozemberczki in #82
• Simplify existing models by @cthoyt in #69
• Clean up models and provide abstractions by @cthoyt in #83

💾 Data Cleaning

• Clean up DrugBank and TWOSIDES importers by @cthoyt in #57
• Add additional datasets by @cthoyt in #61

🤖 Design

• Provide base class for dataset loaders by @cthoyt in #59
• Move back the BatchGenerator to the data namespace. by @benedekrozemberczki in #80

🏠 House keeping

• Black update conformity by @benedekrozemberczki in #66
• Remove check box that's automated with CI by @cthoyt in #64
• Standardize documentation style with darglint by @cthoyt in #70
• Update citations and add additional testing by @cthoyt in #72
• New release updates, citation modification and correcting paper references by @benedekrozemberczki in #85

New Contributors

• @andrejlamov made their first contribution in #67
• @kajocina made their first contribution in #68
• @mughetto made their first contribution in #71
• @hzcheney made their first contribution in #63
• @andriy-nikolov made their first contribution in #73
• @kkaris made their first contribution in #53
• @YuWVandy made their first contribution in #77
• @sebastiandro made their first contribution in #74

Full Changelog: v0.0.9...v0.1.0