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Algorithm to parse, assemble and align genomic sequences by use machine learning techniques. The resulting sequences are used to form NCBI-BLAST respects and return sequence homologs.

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assembly_scaffold_BLAST.py

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assembly_scaffold_BLAST

This program is designed to assemble paired end reads deterministically, and assigning fourmer frequency weights to the assembled paired end R1 and R2 read sequences.

Then, global assembly begins.

This process ..

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Algorithm to parse, assemble and align genomic sequences by use machine learning techniques. The resulting sequences are used to form NCBI-BLAST respects and return sequence homologs.

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machine-learning bioinformatics-pipeline biopython de-novo-assembly homology philogenetic-trees alignment-algorithm graph-theory-algorithms

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