Fast k-mer based tool for multi locus sequence typing (MLST)
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Updated
Sep 3, 2020 - Python
Fast k-mer based tool for multi locus sequence typing (MLST)
Set of tools for viral metagenomics.
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
Computer vision in the service of bacteriology refers to the use of computer algorithms and technology to analyze and interpret images of bacteria for the purpose of identifying and characterizing different types of bacteria.
This repository contains the script developed for my Master Thesis in gut bacterial growth curves.
Retrieve and create a custom BLAST database by taxonomic search
An atlas of high-quality Bacillus cereus group genomes with standardized, manually curated metadata
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