Protein Alignment and Detection Interface
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Updated
Apr 1, 2024 - C
Protein Alignment and Detection Interface
ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
Pipeline plugins for PALADIN, providing HPC support, abundance (taxonomy, go terms), customized reports, etc
Protein alignment using gap penalty traceback with the Blosum62 Matrix
Flexible protein alignment using Protein Units
FASTA Alignment search for BsaI and BsmBI restriction sites in the ORF6 protein to verify assertions made by Bruttel, et. al. in "Endonuclease fingerprint indicates a synthetic origin of SARS-CoV-2."
For viewing, analyzing, and generating figures of protein sequence alignments.
Benchmark the performance of sequence alignment workflows
MutFold | Human breast cancer associated mutant protein structure prediction and alignment application
stitching coding regions from exon alignments for the protein to genome alignments.
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