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Using ComBat-Seq over RSEM estimated counts #23

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ali-kishk opened this issue Apr 27, 2021 · 1 comment
Open

Using ComBat-Seq over RSEM estimated counts #23

ali-kishk opened this issue Apr 27, 2021 · 1 comment

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@ali-kishk
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Hi,
I have 2 RNA-Seq studies on RSEM counts only.
Would it a problem using the float RSEM counts as an input to ComBat-Seq? or Should I round them?

Thanks in advance!
@kalavattam
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This question is addressed here: https://www.biostars.org/p/472325/#472338

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@ali-kishk @kalavattam