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[Example] Benchmark example code #304

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4 of 9 tasks
waltsims opened this issue Feb 15, 2024 · 0 comments
Open
4 of 9 tasks

[Example] Benchmark example code #304

waltsims opened this issue Feb 15, 2024 · 0 comments
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example Request an example of principle of functionality
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@waltsims
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waltsims commented Feb 15, 2024

Describe the example
Include the benchmark examples from transcranial simulations as scripts as well as notebooks.

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Sources
The input data for the benchmarks can be found here.

Additional context

  • Some can may take while to run, depending on the level of resolution, but the default can be the lowest resolution.
  • It makes sense to use scipy.fft rather than scipy.fftpack in utils.filters.py as it does not upcast to np.complex128 which is leading to significant memory issues.
  • Example 1-6, are axisymmetric, whose binaries are not supported.
@waltsims waltsims added the example Request an example of principle of functionality label Feb 15, 2024
@waltsims waltsims added this to the v0.3.3 milestone Feb 15, 2024
@djps djps self-assigned this Feb 16, 2024
@waltsims waltsims modified the milestones: v0.3.3, v0.3.4 Apr 1, 2024
@waltsims waltsims modified the milestones: v0.3.4, v0.3.6 Apr 16, 2024
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