% VCFGENOTYPECOMPARE(1) vcfgenotypecompare (vcflib) | vcfgenotypecompare (VCF statistics) % Erik Garrison and vcflib contributors
vcfgenotypecompare
vcfgenotypecompare
adds statistics to the INFO field of the vcf file describing the amount of discrepancy between the genotypes (GT) in the vcf file and the genotypes reported in the . use this after vcfannotategenotypes to get correspondence statistics for two vcfs.
Type: statistics
0 : Success
not 0 : Failure
vcflib(1)
Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.