Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Cannot install deepcell #617

Open
Pascal-bucketbreaker opened this issue Jul 23, 2022 · 2 comments
Open

Cannot install deepcell #617

Pascal-bucketbreaker opened this issue Jul 23, 2022 · 2 comments
Labels
bug Something isn't working

Comments

@Pascal-bucketbreaker
Copy link

Describe the bug
When installing the deepcell using the pip, the wheel of deepcell-toolbox cannot be built.

To Reproduce
Steps to reproduce the behavior:

  1. Enter 'pip install deepcell'
  2. See error

Expected behavior
It should be successfully installed

Screenshots
image
image
image

Desktop (please complete the following information):

  • OS: [Windows/Anaconda]
  • Version [default/latest]
  • Python Version [3.8.12/3.9](both get to the problem)

Additional context
Add any other context about the problem here.

@Pascal-bucketbreaker Pascal-bucketbreaker added the bug Something isn't working label Jul 23, 2022
@msschwartz21
Copy link
Member

Hi Pascal-bucketbreaker,

Can you verify that you are installing deepcell>=0.12.0?

Generally we recommend that you use deepcell out of a docker container as we cannot ensure support for all operating systems. There are instructions in the readme for how to get started with docker.

@amcrabtree
Copy link

I too had this error when trying to pip install to a Linux VM. I fixed it by finding the C++ compiler path, "gcc" and then specifying that path during the pip install. The default pip install was trying to take a gcc from a different path and said my permission was denied to it. You'd have to adapt the solution for Windows, but this did the trick for me:

$ which gcc
/usr/bin/gcc

$ PATH=/usr/bin:$PATH pip install deepcell

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

3 participants