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DESCRIPTION
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DESCRIPTION
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Package: NMproject
Type: Package
Title: Script Based 'NONMEM' Model Development
URL: https://tsahota.github.io/NMproject/, https://github.com/tsahota/NMproject
BugReports: https://github.com/tsahota/NMproject/issues
Version: 0.6.9
Authors@R: c(
person("Tarj", "Sahota", email = "t.sahota0@gmail.com",
role = c("aut", "cre", "cph")),
person("AstraZeneca", role = "cph"),
person("Nuria", "Buil Bruna", email = "nuria.buil.bruna@gmail.com",
role = c("ctb")),
person("Stein", "Schalkwijk", email = "steinschalkwijk@gmail.com",
role = c("ctb")))
Maintainer: Tarj Sahota <t.sahota0@gmail.com>
Description: Industrialisation of 'NONMEM'
<https://www.iconplc.com/innovation/nonmem/> via fully and rapidly reusable
model development 'workflows' entirely within 'RStudio'. Quickly get started
with new models by importing 'NONMEM' templates from the built-in code
library. Manipulate 'NONMEM' code from within R either via the tracked
'manual edit' interface or 'programmatically' via convenience functions.
Script 'workflows' by piping sequences of model building steps from control
file creation, to execution, to post-processing and evaluation. Run caching
makes 'workflows' R markdown friendly for easy documentation of thoughts and
modelling decisions alongside executable code. Share, reuse and recycle
'workflows' for new problems.
License: GPL (>= 3)
Encoding: UTF-8
Imports:
shiny,
dygraphs,
DT,
git2r (>= 0.18.0),
dplyr (>= 0.7.2),
methods,
stringr (>= 1.3.1),
rlang (>= 0.2.1),
diffobj (>= 0.1.11),
tidyr (>= 1.0.0),
miniUI (>= 0.1.1),
rstudioapi (>= 0.7),
crayon (>= 1.3.4),
rprojroot,
htmltools,
rmarkdown,
magrittr,
usethis,
lifecycle (>= 1.0.0)
RoxygenNote: 7.1.1
Suggests:
testthat,
knitr,
ggplot2,
data.tree,
xpose,
lubridate,
pmxTools,
Hmisc,
rsample,
renv,
desc,
purrr,
digest,
covr,
devtools,
roxygen2,
xfun
Collate:
'NMproject-options.R'
'NMproject-package.R'
'Vectorize.R'
'addin-apps.R'
'apply_manual_edit.R'
'basic-ctl-manipulation.R'
'utils.R'
'basic_methods.R'
'boot.R'
'nm_object.R'
'cache.R'
'check_installation.R'
'covariate-explore.R'
'cran_note_handle.R'
'data_filter.R'
'decision.R'
'deprecated.R'
'derived-data-prep.R'
'developer-funs.R'
'directory-management.R'
'dollar_input.R'
'find-nonmem.R'
'import-code.R'
'init_funs.R'
'input_data.R'
'job_stats.R'
'low-level-ctl-handling-funs.R'
'make_OCC_every_dose.R'
'make_project.R'
'manual-edit.R'
'monitoring.R'
'nm-gettersetters.R'
'nm_diff.R'
'nm_read_table.R'
'nm_render.R'
'nm_tran.R'
'nm_tree.R'
'nmsave.R'
'ofv.R'
'output_table.R'
'param-manipulate.R'
'plot_iter.R'
'post-run-summaries.R'
'prompt_overwrite.R'
'psn_style_scm.R'
'read_ext.R'
'rmd_to_vignette.R'
'run_nm.R'
'shiny-apps.R'
'show-file.R'
'sim-diagnostics.R'
'snippet_setup.R'
'stepwise-covariate.R'
'subroutine.R'
'system-hooks.R'
'text.R'
'todo.R'
'update_parameters.R'
'with_temp_git_config.R'
'zzz.R'
Roxygen: list(markdown = TRUE)