#
shotgun
Here are 56 public repositories matching this topic...
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
workflow
bioinformatics
nanopore
pipeline
nextflow
shotgun
pathogen
metagenomics
classification
profiling
microbiome
illumina
long-reads
taxonomic-classification
nf-core
taxonomic-profiling
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Updated
May 24, 2024 - Nextflow
Computational Analysis of Novel Drug Opportunities
python
machine-learning
bioinformatics
shotgun
biomedical-informatics
drug-discovery
drug-repurposing
docking
drug-design
multitarget
-
Updated
May 14, 2024 - Python
A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxa to identify (and remove) are Homo and Homo sapiens. Removal is optional.
workflow
nanopore
pipeline
nextflow
shotgun
filter
metagenomics
edna
microbiome
fastq
metabarcoding
long-reads
taxonomic-classification
de-identification
nf-core
short-reads
taxonomic-profiling
decontamination
-
Updated
May 9, 2024 - Nextflow
Deadline plugin for tk-multi-deadlinereviewsubmission
-
Updated
Feb 27, 2024 - Python
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