seurat
Here are 113 public repositories matching this topic...
sc-RNAseq analysis for Transcriptomics Course 2021 (MSc Bioinformatics for Computational Genomics)
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Apr 2, 2022
Transcriptional and epigenetic signature of muscle tissue cells linked to atrophy
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Jul 17, 2023 - Python
Single Cell RNA_Seq Analysis of Medicago Truncatula Data
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Mar 21, 2022 - R
Project for the Transcriptomic course of "Bioinformatics for Computational Genomics" MSc
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Sep 3, 2023 - HTML
collab | DFC
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Jul 6, 2023 - Jupyter Notebook
R scripts used to analyze single-nucleus RNA-seq data generated from in vitro differentiated pancreatic organoids, described in Huang, L. et al. 2021 (in press).
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Mar 17, 2021 - R
Collection of personal singularity container image definition files
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May 23, 2023
scRNA cluster via Seurat package
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Sep 15, 2023 - R
Visualize Marker Expression as violin plots and on a UMap. To be used after Seurat.Clustering
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Jul 15, 2021 - Python
Source Code for Single-Cell RNA-Seq Data Analysis
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Nov 26, 2019 - R
Basic scRNA-seq analysis in Seurat using GBM data
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Sep 6, 2022
This repo contains scripts to analyze Single-Cell RNA-Seq data obtained from human enteriod cell culture.
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Dec 28, 2022 - R
Simple functions to create ggplot2 plots to visualize single cell expression data in 2D dimensionality reductions to avoid overplotting. Includes a wrapper for Seurat objects.
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Jul 4, 2023 - R
Modification of the Original ScType Method for Barcode Annotation using KNN Algorithm
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Feb 10, 2024 - R
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