A cost-sensitive BERT that handles the class imbalance for the task of biomedical NER.
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Updated
Apr 11, 2024 - Python
A cost-sensitive BERT that handles the class imbalance for the task of biomedical NER.
The goal of this project is to help people on the front-line fighting COVID-19 find the most relevant research papers to better understand key pain-points and apply these findings into their plans and operations in addressing the pandemic.
Generating brain activation maps from free-form text query
Code for ECIR 2022 paper Local Citation Recommendation with Hierarchical-Attention Text Encoder and SciBERT-based Reranking
Retired repository for Machine Learning utils at the Wellcome Trust (now deprecated).
Literature indexing using Graph Neural Networks and label-guided text embeddings.
Code for Findings of EMNLP 2022 short paper "CDGP: Automatic Cloze Distractor Generation based on Pre-trained Language Model".
Final project for the "Deep Natural Language Processing" course @ PoliTo, 2022/2023
Comparison of binary classification models to predict whether text contains a description of a biological strategy relevant to biomimetic applications or not.
Do authors on arXiv make their code and data available? We're building text mining and machine learning tools to find out!
Browse Covid-19 & SARS-CoV-2 Scientific Papers with Transformers 🦠 📖
Webserver of text2brain for predicting brain activation maps from free-form text query
Implementation for EACL 2021 paper "Scientific Discourse Tagging for Evidence Extraction".
Source-code for Dissertation: "Transforming Peer Review: Using state-of-the-art Transformers for AI Assisted Peer Review"
This repository contains the source code for the first and the second task of DeftEval 2020 competition, used by the University Politehnica of Bucharest (UPB) team to train and evaluate the models.
Identifying Used Methods and Datasets in Scientific Publications
AGATHA: Automatic Graph-mining And Transformer based Hypothesis generation Approach
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