OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

A Matlab software package to do 2D cell segmentation.

Analyze local cell edge motions (e.g. protrusion and retraction) and to locally sample intracellular fluorescence signals in 2D fluorescence microscopy data.

Processing of raw ratiometric biosensor images (for example based on FRET) into fully corrected "ratio maps" or "activation maps" — images showing the localized activation of the biosensor.

Biomedical Image Processing involves applying computer algorithms to analyze and enhance medical images, such as X-rays or MRI scans. It aims to extract meaningful information, diagnose diseases, and aid in medical research by employing advanced image analysis techniques and computational tools.

This repository enables easy and fast medical image reconstruction in Python.

Data Consistency Toolbox for Magnetic Resonance Imaging

u-inferforce (Traction Force Microscopy) is a MATLAB software that reconstructs traction forces of cells adhered on elastic gel doped with beads.

A Slicer extension to provide a GUI around pyradiomics

dcmqi (DICOM for Quantitative Imaging) is a free, open source C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

Segmentation-based measurements with DICOM import and export of the results.

An extension to 3D Slicer to support quantitative imaging and image-guided interventions research in prostate cancer.

clathrin-mediated endocytosis analysis

Website of Olivier Bernard, Professor at the university of Lyon (INSA) and Deputy Director of the CREATIS research laboratory

Learning materials for https://github.com/qiicr/dcmqi

Quantitative Fluorescent Speckle Microscopy

This is the home for deployment scripts used to setup the Radiomics platform. This site was published at data.radiomics.io and maintained by @Kitware.

3D Slicer extension for supporting PI-RADS v2 reading

Matlab toolbox for polyenergetic quantitative (polyquant) X-ray CT reconstruction with demos.