Code used in relation to the neurodegenerative disorder study with [11C]PiB and [18F]FE-PE2I tracers (2022). Image preparation, model inference and metrics extraction.
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Updated
Jun 22, 2023 - Python
Code used in relation to the neurodegenerative disorder study with [11C]PiB and [18F]FE-PE2I tracers (2022). Image preparation, model inference and metrics extraction.
This repository is the result of an academic project at Ecole Centrale in Nantes, France, with my classmate @damien-gautier-nantes. The aim of this project was to evaluate the performance of universal segmentation models for segmenting cancerous lesions. The UniverSeg and Segment Anything (SAM) models were tested.
A minimum Monte Carlo simulation code for positron propagation in the magnetic field.
Code and code fragments and useful informations I am using in my research in computed tomomography
This package provides auxiliary functions for calculating Simultaneous Confidence Corridors (SCCs) on PET neuroimaging data. This package is developed as an auxiliary package to the project:
This repo contains code that implements vPET-ABC. Currently, we have included Python code attempting GPU acceleration on FDG compartment models.
Classification CNN to predict colorectal cancer on PET slices in the transverse plane.
Simulation and analysis code to accompany the paper (still to come...)
tacmagic: PET Analysis in R
DMLLTDetectorPulseDiscriminator - A supervised machine learning approach for shape-sensitive detector pulse discrimination in lifetime spectroscopy applications
Implementation of RESOLUTE pseudo-CT method for mMR.
Képalkotás szenzor adatokból
Scripts for analyzing and visualizing research data
Pydra tasks for PETPVC designed for Clinica
This repository contains CMOS designs and performance outputs of time-to-digital converter (TDC) architectures.
Whole Body Positron Emission Tomography Attenuation Correction Map Synthesizing using 3D Deep Networks
Command line tools for PET-MR (pre-)processing
Automated brain PET analysis pipeline
REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
SimPET is a framework intended to setup and launch PET imaging Monte Carlo simulations on a simple way. It uses popular tools such as SimSET and STIR
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