Supplementary files for Ribeiro et al. ISME 2018
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Updated
Feb 26, 2020 - Shell
Supplementary files for Ribeiro et al. ISME 2018
This work is part of the PhytoArk project.
from first principles to end to end ecosystem models
Functions and a walkthrough to visualize common photosynthesis-irradiance relationships
Calculate various MHWs(Marine Heat Waves) properties from daily SST datas
Research Derby project to study the connection between MJO, chlorophyll-a, and SST
Correction for flow cytometry histograms when part of the population is in noise
Function that calculates the maximum phytoplankton growth rate at specified temperature(s) according to the Eppley growth curve
An online calculator for iron limitation culture experiments
Provides Mathematica code to generate results from "Modeling the Metabolic Evolution of Mixotrophic Phytoplankton in Response to Rising Ocean Surface Temperatures"
Superseded by https://github.com/SalishSeaCast/SOG-Bloomcast-Ensemble. SoG-bloomcast is a an operational oceanography project to provide daily updated forecasts of the first spring phytoplankton bloom in the Strait of Georgia on the British Columbia south coast. In addition to being part of an active research program on the physics and biogeoche…
Branch of the SoG-bloomcast project that uses an ensemble forecast.
Modules for the Lagrangian Plankton Model (LPM) integrated on the PALM LES model in the ocean mixed layer
A PyTorch implementation of the Multi-Mode CNN to reconstruct Chlorophyll-a time series in the global ocean from oceanic and atmospheric physical drivers
Code and data for Randelhoff et al. (2019), "The evolution of light and vertical mixing across a phytoplankton ice-edge bloom"
As part of my PhD I created a 1D biogeochemical configuration based on PISCES model (version 1 - Bopp et al, 2005) The configuration was created to study the impact of environmental changes (mainly Mixed Layer Depth and Light) over Southern Ocean primary production, from the seasonal to decadal scales.
Southern Ocean phytoplakton observations stored in a relational SQL database
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