Nanomotif - a tool for identifying methylated motifs in metagenomic samples
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Updated
May 31, 2024 - Python
Nanomotif - a tool for identifying methylated motifs in metagenomic samples
Comprehensive analysis pipeline for ATAC-seq data including QC, alignment, peak calling, annotation, motif analysis, and gene enrichment. Delivers key insights and reproducible results for chromatin accessibility studies.
motif locator for plant resistance genes.
Automatic Motif Detection wrapper for dotmotif
Estimating Phylogenetic trees using six microorganisms 16S rRNA gene with Unsupervised Learning, web based tools and Molecular Evolutionary Genetics Analysis MEGA7
surrogate quantitative interpretability for deepnets
Motif manipulation functions for R.
Shiny app for screening for core promoter occurrences close to expressed transposons TSSs.
squid repository for manuscript analysis
Proteome-wide motif search for specific PTM(Post Translational Modification)
Time Series with Matrix Profile in Java
Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
Time-series analysis using the Matrix profile in Julia
Python package to plot sequence logos
Enrichment analysis of motifs with ancient and recent CNEs
English Project
Motif analysis in gene regulatory networks
This application searches inside a text sequence for words that resemble those inside a list of similar words.
Pipeline webscraping to extract and download Solanum lycopersicum promotors
Bioinformatic cis-motif-, H3K27me3 correlation- and GO-analysis conducted for my master's thesis
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