A customizable pipeline for data extraction from MIMIC-IV.
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Updated
Jan 6, 2024 - Jupyter Notebook
A customizable pipeline for data extraction from MIMIC-IV.
Toolkit for evaluating and monitoring AI models in clinical settings
Code for the paper: Multi-Label Clinical Time-Series Generation via Conditional GAN (IEEE TKDE)
OMOP standardization pipeline for ICU databases
🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datasets, cohorts, prediction tasks, endpoints, preprocessing, and models. Paper: https://arxiv.org/abs/2306.05109
Data Science & Machine Learning Project applied to Healthcare
Research Methodology Project
Predicting length of stay in hospitals intensive care unit using MIMIC IV
Official repo for "Characterizing Stigmatizing Language in Medical Records" (ACL 2023)
A toolkit for developing foundation models using Electronic Health Record (EHR) data.
Descriptive & prescriptive analysis of the effects of Vasoconstrictive medication via MIMIC's database using Targeted Maximum Likelihood Estimation for Causal Inference & ML techniques
mimic4fhir converts data from MIMIC IV database (PostgreSQL) to HL7 FHIR R4 resources or the German Medical Informatics Initiative core data sets.
Embeddings generation from MIMIC-IV and MIMIC-CXR
[arXiv'24] The official implementation code of LEADER.
A CLI tool for extracting event logs out of MIMIC Databases.
TemporAI-MIVDP: Adaptation of MIMIC-IV-Data-Pipeline for TemporAI
Patient Discharge Classification based on the Hospital Treatment Process (ICPM 2021)
Team Cyan's function toolbox for exploring databases
Towards a CKD (Chronic Kidney Disease) dataset.
Implementation of the Transformer with Multi-channel attention mechanism and evalutation on the MIMIC-IV
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