This code calculates 3D system of Langevin equations describing behaviour of nuclear shape during fission process
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Updated
Nov 23, 2023 - Roff
This code calculates 3D system of Langevin equations describing behaviour of nuclear shape during fission process
Simulation of a particle in a 2D Lennard-Jones gas for studying brownian motion, the Langevin equation, and non-equilibrium fluctuation-dissipation relations. Langevin simulation for studying first passage time, survival probabilities under various resetting schemes.
Well-tempered metadynamics applied to Langevin field-theoretic simulations of diblock copolymers on the GPU (https://www.tbeardsley.com/projects/lfts/wtmd)
Well-tempered metadynamics applied to Langevin field-theoretic simulations of diblock copolymers on CPUs (https://www.tbeardsley.com/projects/lfts/wtmd)
Multi-condensate state as a functional strategy to optimize the cell signaling output
Langevin Gradient Parallel Tempering for Bayesian Neural Learning.
Unbiased Estimation using Underdamped Langevin Dynamics (ULD)
Python scripts to analyze and visualize the data presented in the research article: "The maximum solubility product marks the threshold for condensation of multivalent biomolecules".
Langevin Field-Theoretic Simulation of Diblock Copolymers on the GPU (https://www.tbeardsley.com/projects/lfts/fts_gpu)
Variationally enhanced sampling for single-particle langevin dynamics with neural network bias potentials and path collective variables. Based on OpenMM + PyTorch.
A set of integrators for the Langevin equation.
Bayesian Neural Network (BNN) implementations based on Langevin Dynamics and tested on real-world data
Langevin equation MD integration
Cambridge Surface Sciences Group - Summer Project 2020
Python module for the evaluation of probability densities and exit rates in a tubular ensemble
The GitHub repository for "Accelerating Approximate Thompson Sampling with Underdamped Langevin Monte Carlo", AISTATS 2024.
A simple (PI)MD code for 1D systems
SGLD preconditioning performance, generalization and stability experiments
Python and Shell scripts used in the study "Separation of sticker-spacer energetics governs the coalescence of biomolecular condensates"
Spring
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