BioJS based Sequence Viewer plugin for the GMOD JBrowse genome browser
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Updated
Apr 8, 2016 - JavaScript
BioJS based Sequence Viewer plugin for the GMOD JBrowse genome browser
ADAMA web-service wrapper to transform "Translated small ORFs" GFF3 data (Hsu et al. 2016) into JBrowse compatible JSON
Custom JBrowse plugin to map JBrowse/Store/SeqFeature/REST to the Araport Adama API endpoints
ADAMA web-service wrapper to transform "Chromatin States" GFF3 data into JBrowse compatible JSON
JBrowse plugin enabling the ability to enrich the 1001 Genomes Variants track with metadata from 1001genomes.org Master Accession List API
No longer actively developed...See README
JBrowse plugin enabling the ability to enrich the Ensembl Variants (VCF) track with metadata from rest.ensemblgenomes.org API
A simple Shiny app for visualizing Sars-CoV-2 data.
External JB2 plugin implementing a QuantitativeSequence track for displaying base-resolution models.
JBrowse plugin enabling the ability to dynamically load tracks from data/configurations stored in the Cyverse Data Store
Backup an apollo instance to a git repository
JBrowse plugin that supports smallRNA alignments
JBrowse plugin to display multiple BigWig tracks as a stacked proportion
Convert the output of BLAST to a BED file format that's suitable for uploading to JBrowse.
Add a description, image, and links to the jbrowse topic page so that developers can more easily learn about it.
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