DESeq2 Analysis of Human Airway Smooth Muscle Cells
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Updated
Jul 30, 2023 - R
DESeq2 Analysis of Human Airway Smooth Muscle Cells
Performing RNA-seq data analysis with DESeq2 package of bioconductor
Automated DE analysis by DESeq2
Tutorial for RNA sequence data processing and simple downstream analysis with Drosophila melanogaster
RNA-seq replication analysis.
Basic script for RNA-seq analysis with DESeq2
Jupyter notebooks for DGE results and ontology analysis and visualisation.
Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2
Performing RNA-Seq data analysis and quality control using DESeq2 in R.
Bulk Rna-seq Analysis
Repository containing code I have written in R.
Differential Gene Expression (DGE) Analysis with DESeq2 using a reference genome
DESeq2 Analysis and visualization of specific genes, notably Pasilla. Script aims to identify and filter differentially expressed genes and neatly store the results. The project also includes Gene Ontology (GO) and Kegg pathway analyses, providing insights into the biological processes affected by the Pasilla gene depletion.
Analysis of B. saida full liver transcriptome data from raw reads to gene ontology.
Part of the final project for an Intro to Bioinformatics graduate course. Using RStudio I ran DESeq2 to show differentially expressed genes between control mice and mice infected with RSV.
Neste projeto descrevo diferentes parâmetros e opções para a execução de programas necessários à análise de Rna-Seq, além de incluir informações e opniões que possam facilitar a escolha da melhor opção que se adque à análise em questão.
An application for exploring and visualizing differential gene expression data created with DESeq2
Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline
Differential Gene Expression analysis in R using DESeq2
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